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Principle
The key principle underlying in LLE is often that the solubility differs significantly
between the liquid, producing thermodynamic driving force for transfer from one
phase to another.
when solvent1 and solvent2 are immiscible liquids (By convention the organic
solvent is (1) and water is (2) )
Extraction Procedure
Shake the separatory funnel vigorously.
Now, shake the funnel vigorously for a few seconds. Release the pressure, then
again shake vigorously. About 30 sec total vigorous shaking is usually sufficient
to allow solutes to come to equilibrium between the two solvents.
Solvent Selection
For the selection of a suitable solvent, one has to consider not only the
extraction selectivity, but also the ease of handling and regeneration and
production cost. Some of the factors are:
Factors to be considered:
• Selectivity
• Distribution coefficient
• Insolubility of solvent
• Recoverability of solute from solvent
• Density difference between liquid phases
• Interfacial tension
• Chemical reactivity
• Cost
• Viscosity, vapour pressure
• Flammability, toxicity
Distillation
This method is adopted to obtain both the solute and the solvent from a solution.
Here the solute is a soluble solid. Distillation actually involves both evaporation
as well as condensation. Let us take the example of a salt solution. The solution
is taken in a distillation flask and heated so that the solvent slowly starts
evaporating. The distillation flask is attached to a Leibig’s condenser which has a
lower tube for the inlet of cool water and an upper tube for the outlet of water.
The circulation of cold water in the condenser helps to cool the vapours from the
solution and they form the distillate which is collected in a separate container
attached to the condenser. The complete solution is not allowed to evaporate in
this case but when a little is left, it is heated separately in an open container
leaving it to evaporate completely. The remaining residue is the solute i.e. salt
and the distillate collected is the solvent i.e. water.
Dalton's law states that the total vapour pressure is the sum of the vapour
pressures of each individual component in the mixture. When a multi-component
system is heated, the vapour pressure of each component will rise, thus causing
the total vapour pressure to rise. When the total vapour pressure reaches the
ambient pressure, boiling occurs and liquid turns to gas throughout the bulk of
the solution. Note that a given mixture has one boiling point, when the
components are mutually soluble.
Repeating the distillation process on the collected liquid to improve the purity of
the product is called double distillation. Although the term is most commonly
applied to liquids, the reverse process can be used to separate gases by
liquefying components using changes in temperature and/or pressure.
The solubility of protein depends on, among other things, the salt concentration
in the solution. At low concentrations, the presence of salt stabilizes the various
charged groups on a protein molecule, thus attracting protein into the solution
and enhancing the solubility of protein. This is commonly known as salting-in.
Many types of salts have been employed to effect protein separation and
purification through salting-out. Of these salts, ammonium sulphate has been the
most widely used chemical because it has high solubility and is relatively
inexpensive. Because enzymes are proteins, enzyme purification can be carried
out by following the same set of procedures as those for protein, except that
some attention must be paid to the consideration of permanent loss of activity
due to denaturation under adverse conditions.
There are two major salting-out procedures. In the first procedure, either a
saturated salt solution or powdered salt crystals are slowly added to the protein
mixture to bring up the salt concentration of the mixture. For example, the salt
concentration reaches 25% saturation when 1 ml of the saturated salt solution is
added to 3 ml of the salt-free protein solution; 50% for 3 ml added; 75% for 9 ml
added; and so on. The precipitated protein is collected and categorized
according to the concentration of the salt solution at which it is formed. This
partial collection of the separated product is called fractionation. For example,
the fraction of the precipitated protein collected between 20 and 21% of salt
saturation is commonly referred to as the 20-21% fraction. The protein fractions
collected during the earlier stages of salt addition are less soluble in the salt
solution than the fractions collected later.
Whereas the first method just described uses increasing salt concentrations, the
following alternative method uses decreasing salt concentrations. In this
alternative method, as much protein as possible is first precipitated with a
concentrated salt solution. Then a series of cold (near 0ºC) ammonium sulphate
solutions of decreasing concentrations are employed to extract selectively the
protein components that are the most soluble at higher ammonium sulphate
concentrations. The extracted protein is recrystallized and thus recovered by
gradually warming the cold solution to room temperature. This method has the
added advantages that the extraction media may be buffered or stabilizing
agents be added to retain the maximum enzyme activity. The efficiency of
recovery typically ranges from 30 to 90%, depending on the protein. The
recrystallization of protein upon transferring the extract to room temperature
may occur immediately or may sometimes take many hours. Nevertheless, very
rarely does recrystallization fail to occur. The presence of fine crystals in a
solution can be visually detected from the turbidity.
Chromatography
Chromatography (from Greek "color" and graphein "to write") is the collective
term for a set of laboratory techniques for the separation of mixtures. It involves
passing a mixture dissolved in a "mobile phase" through a stationary phase,
which separates the analyte to be measured from other molecules in the mixture
based on differential partitioning between the mobile and stationary phases.
Subtle differences in a compound's partition coefficient result in differential
retention on the stationary phase and thus changing the separation.
Types of Chromatography
• Liquid Chromatography – separates liquid samples with a
liquid solvent (mobile phase) and a column composed of solid
beads (stationary phase)
• Gas Chromatography – separates vaporized samples with a carrier gas
(mobile phase) and a column composed of a liquid or of solid beads
(stationary phase)
Applications
• Pharmaceutical Company – determine amount of each chemical found in
new product
• Hospital – detect blood or alcohol levels in a patient’s blood stream
• Law Enforcement – to compare a sample found at a crime scene to
samples from suspects
• Environmental Agency – determine the level of pollutants in the water
supply
Manufacturing Plant – to purify a chemical needed to make a
product
Paper Chromatography
Paper chromatography is one of the earliest known molecular separation
techniques. Paper chromatography is an analytical chemistry technique for
separating and identifying mixtures that are or can be coloured,
especially pigments. This can also be used in secondary or primary colours in ink
experiments. This method has been largely replaced by thin layer
chromatography, however it is still a powerful teaching tool
Principle
• Capillary Action – the movement of liquid within the spaces of a porous
material due to the forces of adhesion, cohesion, and surface tension. The
liquid is able to move up the filter paper because its attraction to itself is
stronger than the force of gravity.
TLC involves spotting the sample to be analyzed near one end of a sheet of glass
or plastic that is coated with a thin layer of an adsorbent. The sheet, which can
be the size of a microscope slide, is placed on end in a covered jar containing a
shallow layer of solvent.
When the spot of mixture is dry, the plate is stood in a shallow layer of solvent in
a covered beaker. It is important that the solvent level is below the line with the
spot on it.
As the solvent slowly travels up the plate, the different components of the dye
mixture travel at different rates and the mixture is separated into different
coloured spots.
As the solvent rises by capillary action up through the adsorbent, differential
partitioning occurs between the components of the mixture dissolved in the
solvent the stationary adsorbent phase. The more strongly a given component of
a mixture is adsorbed onto the stationary phase, the less time it will spend in the
mobile phase and the more slowly it will migrate up the plate
When the solvent front gets close to the top of the plate, the plate is removed
from the beaker and the position of the solvent is marked with another line
before it has a chance to evaporate.These measurements are then taken is order
to calculate the Rf value. The Rf value, or retention factor, of each spot can be
determined by dividing the distance traveled by the product by the total distance
travelled by the solvent (the solvent front). These values depend on the solvent
used, and the type of TLC plate, and are not physical constants
The Rf value for each dye is then worked out using the formula:
For example, if the red component travelled 1.7 cm from the base line while the
solvent had travelled 5.0 cm, then the Rf value for the red dye is:
Visualization
The spots can be visualized using a non destructive method such as exposing
the plate to UV light. The previously invisible spots are visible under UV light.
In some cases, it may be possible to make the spots visible by reacting them
with something which produces a coloured product. A good example of this is in
chromatograms produced from amino acid mixtures.
In another method, the chromatogram is again allowed to dry and then placed in
an enclosed container (such as another beaker covered with a watch glass) along
with a few iodine crystals.
The iodine vapour in the container may either react with the spots on the
chromatogram, or simply stick more to the spots than to the rest of the plate.
Either way, the substances you are interested in may show up as brownish spots.
Gas Chromatography
It involves passing a mixture dissolved in a mobile phase through a stationary
phase, which separates the analyte to be measured from other molecules in the
mixture based on differential partitioning between the mobile and stationary
phases.
Gas chromatography (GC) is a powerful and widely used tool for the separation,
and identification of components in a mixture. GC also known as Vapor-Phase
Chromatography (VPC) and Gas-Liquid Partition Chromatography (GLPC). By
separating the sample into individual components, it is easier to identify
(qualitate) and measure the amount (quantitate) of the various sample
components
Principle of GC
Gas chromatography (GC) is based on partition equilibrium of analyte between a
solid stationary phase (often a liquid silicone-based material) and a mobile gas
(most often Helium). Partitioning process carried out between Moving Gas Phase
and Stationary Liquid Phase
The ideal chromatogram has closely spaced peaks with no overlap of the peaks.
Any peaks that overlap are called coeluting. The time and size of a peak are
important in that they are used to identify and measure the amount of the
compound in the sample. The size of the resulting peak corresponds to the
amount of the compound in the sample. A larger peak is obtained as the
concentration of the corresponding compound increases. If the column and all of
operating conditions are kept the same, a given compound always travels
through the column at the same rate.
For a given set of constant conditions (carrier gas, flow rate of carrier gas,
column temperature, column length, liquid phase, injection port temperature),
the retention time of any compound is always constant. Retention Time is similar
to the “Retardation Factor, Rf” in Thin Layer Chromatography.
Response
Mixtureof knowncompounds
Octane
Decane
1.6min=RT
Hexane
GCRetentionTimeonCarbowax-20(min)
Response
UnknowncompoundmaybeHexane
1.6min=RT
RetentionTimeonCarbowax-20(min)
Applications
• Separation and analysis of organic compounds
• Testing purity of compounds
• Determine relative amounts of components in mixture
• Compound identification
• Isolation of pure compounds
Advantages
1. Very good separation
2. Time (analysis is short)
3. Small sample is needed - µl
Disadvantage
1. Material has to be volatilized at 250 C without decomposition
It also allows the use of a very small sized particle for the column packing
material which gives a much greater surface area for interactions between the
stationary phase and the molecules flowing past it. This allows a much better
separation of the components of the mixture.
There are two variants in use in HPLC depending on the relative polarity of the
solvent and the stationary phase.
The column is filled with tiny silica particles, and the solvent is non-polar -
hexane, for example. A typical column has an internal diameter of 4.6 mm (and
may be less than that), and a length of 150 to 250 mm.
Polar compounds in the mixture being passed through the column will stick
longer to the polar silica than non-polar compounds will. The non-polar ones will
therefore pass more quickly through the column.
Reversed phase HPLC
In this case, the column size is the same, but the silica is modified to make it
non-polar by attaching long hydrocarbon chains to its surface - typically with
either 8 or 18 carbon atoms in them. A polar solvent is used - for example, a
mixture of water and an alcohol such as methanol.
In this case, there will be a strong attraction between the polar solvent and polar
molecules in the mixture being passed through the column. There won't be as
much attraction between the hydrocarbon chains attached to the silica (the
stationary phase) and the polar molecules in the solution. Polar molecules in the
mixture will therefore spend most of their time moving with the solvent.
Non-polar compounds in the mixture will tend to form attractions with the
hydrocarbon groups because of van der Waals dispersion forces. They will also
be less soluble in the solvent because of the need to break hydrogen bonds as
they squeeze in between the water or methanol molecules, for example. They
therefore spend less time in solution in the solvent and this will slow them down
on their way through the column.That means that now it is the polar molecules
that will travel through the column more quickly.
HPLC Column
The column is one of the most important components of the HPLC
chromatograph because the separation of the sample components is achieved
when those components pass through the column. The High performance liquid
chromatography apparatus is made out of stainless steel tubes with a diameter
of 3 to 5mm and a length ranging from 10 to 30cm.
Normally, columns are filled with silica gel because its particle shape, surface
properties, and pore structure help to get a good separation. Silica is wetted by
nearly every potential mobile phase, is inert to most compounds and has a high
surface activity which can be modified easily with water and other agents. Silica
can be used to separate a wide variety of chemical compounds, and its
chromatographic behavior is generally predictable and reproducible.
Type of Detectors
• Absorbance (UV with Filters, UV with Monochromators)
• IR Absorbance
Retention time
The time taken for a particular compound to travel through the column to the
detector is known as its retention time. This time is measured from the time at
which the sample is injected to the point at which the display shows a maximum
peak height for that compound.
• the pressure used (because that affects the flow rate of the solvent)
• the nature of the stationary phase (not only what material it is made of,
but also particle size)
• the exact composition of the solvent
• the temperature of the column
Applications
• HPLC techniques are also used extensively in the isolation and
characterization of novel proteins that will become increasingly important
in the post-genomic age
• This technique is used for chemistry and biochemistry research analyzing
complex mixtures, purifying chemical compounds, developing processes
for synthesizing chemical compounds, isolating natural products, or
predicting physical properties. It is also used in quality control to ensure
the purity of raw materials, to control and improve process yields, to
quantify assays of final products, or to evaluate product stability and
monitor degradation.
• In addition, it is used for analyzing air and water pollutants, for monitoring
materials that may jeopardize occupational safety or health, and for
monitoring pesticide levels in the environment. Federal and state
regulatory agencies use HPLC to survey food and drug products, for
identifying confiscated narcotics or to check for adherence to label claims.
Gel Permeation Chromatography
b) A mobile phase, which is the eluent or liquid which is run through the column.
Gel Permeation Chromatography (GPC) is the method most widely used today for
determining the molecular size and molecular weight distribution of high
polymers. Its speed and relative ease of operation have made the determination
of molecular weight distribution a routine analysis in most cases.
Principle
GPC provides a physical means for separating molecules by their size in solution.
There is a distribution of pore sizes within the packing such that small molecules
can enter most of the pores and are therefore retained the longest, while larger
molecules enter fewer pores and are retained a shorter length of time. By proper
calibration of the columns, size (and in most cases molecular weight) can be
deduced from elution volume.
Sample Requirements
The sample may be either a soluble solid or liquid. At least 0.04 g of sample is
required; however, it is preferred that at least 0.2 g be supplied.
Applications
• GPC can be used to analyze soluble compounds and mixtures that fall in
the size range of about 10 to 5,000 Angstroms. This range covers high
polymers of molecular weight over a million to low molecular weight
polymers additives, such as stabilizers and oils.
• High resolution, low porosity columns are available that can separate
oligomers and other organic compounds, which differ by as little as one
methyl group.
• By combining GPC and intrinsic viscosity data (taken in the same solvent
at the same temperature), a relative measure of long chain branching may
be obtained. Semi-preparative separations of mg (1-10) fractions can be
carried out.
Limitations
• The sample must be soluble in a solvent with which the columns are
compatible. Commonly used organic solvents are toluene,
tetrahydrofuran, trichlorobenzene, and chloroform.
In ion exchange chromatography one can choose whether to bind the substances
of interest and allow the contaminants to pass through the column, or to bind the
contaminants and allow the substance of interest to pass through. Generally, the
first method is more useful since it allows a greater degree of fractionation and
concentrates the substances of interest.
Principle
Ion exchange chromatography involves two primary steps, first the binding of a
protein to a charged resin and second the elution or displacement of the protein
from the charges of the resin. Critical to the former are the pH of the buffer used
to equilibrate and load the proteins onto the column. Factors that control the
elution are pH or ionic strength
The ionic compound consisting of the cationic species M+ and the anionic
species B- can be retained by the stationary phase.
2. Sulphopropyl(SP) -O-CH2-CHOH-CH2-O-CH2-CH2-CH2SO3
Applications
• Ion exchange is widely used in the food & beverage, hydrometallurgical,
metals finishing, chemical & petrochemical, pharmaceutical, sugar &
sweeteners, ground & potable water, nuclear, softening & industrial water,
semiconductor, power, and a host of other industries.
Electrochromatography
Electrochromatography is a chemical separation technique in analytical
chemistry, biochemistry and molecular biology used to resolve and separate
mostly large biomolecules such as proteins. It is a combination of size exclusion
chromatography (gel filtration chromatography) and gel electrophoresis. These
separation mechanisms operate essentially in superposition along the length of a
gel filtration column to which an axial electric field gradient has been added. The
molecules are separated by size due to the gel filtration mechanism and
by electrophoretic mobility due to the gel electrophoresis mechanism.
Additionally there are secondary chromatographic solute retention mechanisms.
Capillary Electrophoresis
Capillary electrophoresis (CE), also known as capillary zone electrophoresis (CZE)
used to separate ionic species by their charge and frictional forces.
traditional electrophoresis, electrically charged analytes move in a
conductive liquid medium under the influence of an electric field
Introduced in the 1960s, the technique of capillary electrophoresis (CE) was
designed to separate species based on their size to charge ratio in the interior of
a small capillary filled with an electrolyte
Types of Electrophoresis
• Capillary
• Native Polyacrylimide Gel Electrophoresis (PAGE)
• SDS-PAGE
• Slab
• Paper
Principle
• Electrophoresis in a buffer filled, narrow-bore capillaries
• Each capillary is about 25-100 μm in internal diameter
• When a voltage is applied to the solution, the molecules move through the
solution towards the electrode of opposite charge
• Depending on the charge, the molecules move through at different speeds
– Separation is achieved
• A photocathode is then used to measure the absorbencies of the
molecules as they pass through the solution
• The absorbencies are analyzed by a computer and they are represented
graphically
Capillary electrophoresis Apparatus
Equipment
• Capillary tube
Varied length but normally 25-50 cm
Small bore and thickness of the silica play a role
Using a smaller internal diameter and thicker walls help
prevent Joule Heating, heating due to voltage
Electrophoretic Mobility
– The movement of ions solely due to the electric field, potential
difference
– Cations migrate toward cathode
– Anions migrate toward anode
– Neutral molecules do not favor either
Application
• Analysis of carbohydrates
• Analysis of inorganic anions/metal ions
• DNA profiling
• Protein identification
Advantages
• Fast
• Small Sample
• Relatively inexpensive
• Automated
Disadvantages
• Cannot identify neutral species
• Cannot discern shape
Electrophoretic Separation
Electrophoresis
Electrophoresis is the motion of dispersed particles relative to a fluid under the
influence of a spatially uniform electric field.
Principle: These forces (electric and viscous drag) act in opposite directions and
due to the difference in magnitude of the forces, the particle moves. When the
forces are balanced the particle is stationary. This is the principle underlying the
technique of electrophoresis. Consider a particle which is being pulled forward by
the electric force (Eq, where E is the electric field and q is the charge), the other
force called the viscous drag (fv, f is frictional coefficient and v the velocity of the
molecule)
←fv Eq→
Since the protein retains its folded conformation, its hydrodynamic size and
mobility on the gel will also vary with the nature of this conformation (higher
mobility for more compact conformations, lower for larger structures like
oligomers). If native PAGE is carried out near neutral pH to avoid acid or alkaline
denaturation, then it can be used to study conformation, self-association or
aggregation, and the binding of other proteins or compounds.
Thus native gels can be sensitive to any process that alters either the charge or
the conformation of a protein. This makes them excellent tools for detecting
things such as:
changes in charge due to chemical degradation (e.g. deamidation)
unfolded, "molten globule", or other modified conformations
oligomers and aggregates (both covalent and non-covalent)
binding events (protein-protein or protein-ligand)
These properties, and their relatively high throughput, make native gels
excellent tools for analyzing accelerated stability samples, demonstrating
comparability of different lots or processes, or examining the effects of
excipients.
The other type of gel used is agarose gel. Agarose gels can also be used to
separate native protein. They do not have a uniform pore size, but are optimal
for electrophoresis of proteins that are larger than 200 kDalton.
SDS PAGE
SDS (sodium dodecyl sulfate) is a detergent (soap) that can dissolve
hydrophobic molecules but also has a negative charge (sulfATE) attached to it.
Therefore, if a cell is incubated with SDS, the membranes will be dissolved, all
the proteins will be soluablized by the detergent, plus all the proteins will be
covered with many negative charges. So a protein that started out like the one
shown in the top part of figure 1 will be converted into the one shown in the
bottom part of figure 1. The end result has two important features: 1) all proteins
retain only their primary structure and 2) all proteins have a large negative
charge which means they will all migrate towards the positve pole when placed
in an electric field
If the proteins are denatured and put into an electric field, they will all move
towards the positive pole at the same rate, with no separation by size. So the
proteins are placed in an environment that will allow different sized proteins to
move at different rates. The environment provided is polyacrylamide, which is
a polymer of acrylamide monomers. When this polymer is formed, it turns into a
gel and we will use electricity to pull the proteins through the gel so the entire
process is called polyacrylamide gel electrophoresis (PAGE). A
polyacrylamide gel is not solid but is made of a laberynth of tunnels through a
meshwork of fibers (figure 2). Also small molecules can manuver through the
polyacrylamide forest faster than big molecules.
Gel analysis
Dialysis
Principle of Dialysis
Diffusion, Ultrafiltration and Osmosis are the basic physical principles of dialysis.
Diffusion is the net directional movement of molecules occurring from a
solution of higher concentration to a solution of low concentration.
Ultrafiltration is the movement of solvent across a semipermeable
membrane in response to a pressure difference applied across the
membrane.
Osmosis the movement of the solvent (e.g. water) from the side of low
concentration to the side of higher concentration.
Working
Types of Dialysis
There are two primary types of dialysis:
Hemodialysis
Peritoneal dialysis
Hemodialysis
During hemodialysis, blood flows out of the body and by one side of a
semi-permeable membrane.
Dialysate, the fluid in a dialysis machine, flows by the opposite side of the
membrane.
Undesired waste in the blood flows into the dialysate, while bicarbonate
(a needed solute that helps in pH balance) flows from the dialysate into
the blood.
The clean blood is then returned to the body. Removing the harmful waste
and extra salt and fluids helps control blood pressure, pH balance, and
plasma volume, similar to the results of a functioning kidney
Schematic of the principles involved in hemodialysis. Blood flows from the body
into the hemodialysis machine through a filter called a dialyzer. The dialyzer
removes waste from the blood. This blood then re-enters the body.
Peritonial Dialysis
Peritoneal Dialysis (PD) uses a filter to clean the blood and remove excess
fluids
With PD, the blood is cleansed inside the body using one of the body’s own
membranes, the peritoneum, as the filter
In peritoneal dialysis, a sterile solution containing glucose is run through a
tube into the peritoneal cavity, the abdominal body cavity around
the intestine, where the peritoneal membrane acts as a semipermeable
membrane.
The peritoneal membrane or peritoneum is a layer of tissue containing
blood vessels that lines and surrounds the peritoneal, or abdominal, cavity
and the internal abdominal organs (stomach, spleen, liver, and
intestines).
In PD, a soft tube called a catheter is used to fill the abdomen with a
cleansing liquid called dialysis solution.
The peritoneum allows waste products and extra fluid to pass from the
blood into the dialysis solution. The solution contains a sugar called
dextrose that will pull wastes and extra fluid into the abdominal cavity.
These wastes and fluid then leave your body when the dialysis solution is
drained. The used solution, containing wastes and extra fluid, is then
thrown away.
The process of draining and filling is called an exchange and takes about
30 to 40 minutes. The period the dialysis solution is in the abdomen is
called the dwell time. A typical schedule calls for four exchanges a day,
each with a dwell time of 4 to 6 hours. Different types of PD have different
schedules of daily exchanges.
Types of PD
One form of PD, continuous ambulatory peritoneal dialysis (CAPD), doesn’t
require a machine. As the word ambulatory suggests, the patient can walk
around with the dialysis solution in his abdomen.
Another form of PD, continuous cycler-assisted peritoneal dialysis (CCPD),
requires a machine called a cycler to fill and drain your abdomen, usually
when the patient is asleep. CCPD is also sometimes called automated
peritoneal dialysis (APD).
Crystallization
A crystal is a three-dimensional, periodic assembly of individual molecules that
align themselves in a repeating series of "unit cells". .This is true for small
molecule (e.g. salt) crystals and large molecule (protein) crystals.
.Crystallography (from the Greek words crystallon = cold drop / frozen drop, and
graphein = write) is the experimental science of determining the arrangement of
atoms in solids.
.In order to form a highly ordered, homogeneous crystal lattice, proteins have to
be
4. When you obtain a hit, optimize it with a grid around the hit conditions
(vary salt, pH)
Formation of Crystals
• As protein is used up to form the crystal, the concentration drops, and you
get to clear/metastable zone where crystal growth continues to form nice
large crystals
• If the experiment happens too deep in nucleation zone, many nuclei will
form, leading to a „shower“ of crystals
Vapour Diffusion
Setup
Mix e.g. 2 μl of protein solution with 2 μl of precipitant solution Over time, water
will evaporate from the drop, increasing the concentration of both protein and
precipitant
When you have the right concentration and combination of chemicals, pH and
temperature, crystals will appear in the drop!
• When a crystal diffracts, the proteins electrons absorb the energy of the X-
ray radiation.
• When the excited electrons fall back to the ground state, they emit x-ray
radiation which is now scattered
• When a large number of electrons in a crystal scatters the X-rays,
interference occurs that can be additive or subtractive. Results of additive
interference give rise to detectable signals
• The overall emission pattern of a crystal is a function of its 3-D structure,
or, to be more precise, its electron densities (comparable to the ringing of
a bell, the emitted sound waves are analyzed by the ear to recognize a
sound)
• Crystal is turned in the beam 1-2°per image to get a full dataset