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Most cells are too small to be seen with the naked eye therefore we use light microscope. In a light
microscope, a beam of light passes through the cells.
Electron microscopes pass a beam of electrons through the cells. They enable us to see in much
more detail.
The greater the resolving power, the clearer the image. Electron microscopes have a better
resolving power than light microscopes.
Animal cells
Cytoplasm
Cell membrane
Nucleus
Mitochondria
Plant cells
Cell wall
Vacuole
Chloroplasts
Bacterial cells
Do not have mitochondria, chloroplasts or a nucleus (chromosomal DNA and loops of DNA called
plasmid lie loose in the cytoplasm).
Cell wall not made out of cellulose
Some bacteria have a flagellum, which propels the cell through liquid.
1.2 DNA
DNA deoxyribonucleic acid
DNA consists of two molecules that are arranged in a ladder-like structure called a Double Helix
The two strands are held together by hydrogen bonds between pairs of bases.
When a cell grows and divides into two, it first has to make a duplicate copy of each DNA molecule.
This is done by the bonds breaking between the two strands, the strands unwinding, and then new
bases joining each old strand to make new strands.
A molecule of DNA is made out of several subunits called Nucleotides.
To crack the genetic code found in DNA, we need to look at the sequence of bases. Bases are
arranged in triplets called codons.
Bases consists of A (adenine), T (thymine), G (guanine) and C (cytosine). A will always join with T
and G will always join to C to form complementary bases pairings.
A gene is a section of DNA that codes for a protein. It is these proteins and combination of proteins
which give us our phenotype.
Use a detergent/salt mixture to break up the membrane of cells and release the chromosomes
Use a protein-digesting enzyme to break down the protein part of the chromosomes, releasing their
DNA
Add cold methanol, which precipitates the DNA. The strands are now clearly seen.
Discovery of DNA
In the early 1950s two scientists, Rosalind Franklin and Maurice Wilkins, studied DNA using x-rays.
Franklin produced an x-ray photograph that allowed two other researchers, James Watson and
Francis Crick to work out the 3D structure of DNA.
The structure of DNA was found to be a double helix.
The Human Genome Project began in 1989. It was very ambitious and had several aims, including:
To work out the order or sequence of all the three billion base pairs in the human genome
To identify all the genes
To develop faster methods for sequencing DNA
The sequencing project was finished in 2001, and work continues to identify all the genes in the
human genome.
The project involved scientists from 18 different countries and showed how scientists collaborate.
The scientists broke up the chromosomes of cells to get their DNA, and placed them in sequencers
to display the most likely order of this base.
Powerful computer were used to help match the base sequences of genes with the proteins for
which are the code.
Knowing the human DNA profile raises some ethical questions, but many consider this knowledge to be of
benefit:
Genetic engineering
Produces a unique set of genes
Genes can be swapped across species
How it works
A strand of DNA from the cell carrying a gene which enable cells to produce useful proteins is cut
out using a restriction enzyme in order to isolate the gene.
Bacteria contains circular DNA called plasmid DNA which is also cut out using a restriction enzyme
The gene is inserted into the plasmid using ligase enzyme.
The recombinant plasmid is then placed back into the bacterial cell
The bacteria multiplies and produces millions of identical clones, with the DNA coding for required
protein.
The bacteria grows in fermenters. The end product is removed from the fermenter.
Uses
GM insulin
Natural insulin can be taken from the pancreas of a pig or cow. It is used to treat diabetes but is
limited in supply and doesn't suit all people.
Modern practice is to create insulin synthetically using genetically modified bacteria.
The gene for insulin secretion is cut from a length of human DNA and inserted into the DNA of a
bacterium.
Advantages of GM insulin
Wild rice
Scientists have added a gene to wild rice that makes it produce beta carotene. This changes the
colour of the wild rice to a golden colour.
Beta carotene is needed by humans in order to make Vitamin A.
Advantages
Can be used in areas where Vitamin A
deficiency is common and so can help
prevent blindness.
Not meant to be the only solution to Vitamin
A deficiency
Disadvantages
Scientists have added genes to crop plants that make them resistant to herbicides.
This reduces the quantity of herbicide that needs to be used.
GM crops
Worries are:
Not natural
Eating GM food may affect our health
Crops may harm wildlife
Mitosis is used for growth and repair and produces diploid cells identical to each other and the
parent cell.
Meiosis is used for sexual reproduction and produces haploid cells different to each other and the
parent cell.
Mitosis
Mitosis is the type of cell division used for growth, repair and asexual reproduction.
Mitosis occurs wherever new cells are needed. It produces two daughter cells that are identical to
each other from the parent cell.
In mitosis each chromosome is copied exactly.
The new chromosomes are moved to opposite sides of the cell, before the cell divides leaving one
complete set of 46 chromosomes in each of the two new cells.
Meiosis
Meiosis is a different kind of cell division. It is used to produce male and female gametes.
A human body cell contains 46 chromosomes arranged in 23 pairs. The gametes are sperm or
eggs, and only contain half as many chromosomes (23).
This is why meiosis is sometimes called reduction division.
Fertilisation
In humans all reproduction is sexual. It involves joining together haploid gamete cells from each
parent with half the normal number of chromosomes to make a diploid zygote.
The cells from each parent that combine to form the zygote are called gametes. In humans, the
male gamete is called sperm, and the female gamete is called an egg.
When the gametes join they form a cell called a zygote. Human sperm and eggs contain 23
chromosomes. Human zygotes contain 46 chromosomes.
The type of cell division that produces gametes with half the normal chromosome number is called
meiosis. It is used to produce cells for repair and asexual reproduction
Gametes contain different genetic information to each other and to the parent cell. Meiosis is
responsible for causing genetic variation.
1.5 Cloning
Asexual reproduction
Plants can make identical copies (clones) of themselves. Many plants have ways of increasing their
numbers by asexual reproduction
A potato plant can produce many tubers, each of which can grow into a new plant.
Strawberry plants and spider plants produce long stems with tiny plants on the end. These runners
can produce several new plants from one parent.
It's fairly easy to artificially produce new plants by taking a cutting, and waiting for the cutting to
develop new roots and leaves.
Process of cloning
The nucleus of a body cell of the animal to be cloned is transferred to an enucleated egg cell (one
that has had its original nucleus removed).
The cell is then stimulated to start dividing to form an embryo.
This is implanted into the uterus of the surrogate mother who is a different individual to the parent
A new individual develops and is genetically identical to the animal which wished to be cloned.
Ethical issues
Animal cloning raises ethical issues about how far humans should be allowed to interfere in the
production of new life.
Cloning plants is easier than cloning animals. Cloning expensive food crops has been carried out for
many years, and causes the public fewer ethical and moral concerns than animal cloning.
This technique could be used to make many copies of cows that have a high milk yield.
It would produce a herd of cows much faster than if the original cow was used for breeding in the
normal way. Sexual reproduction is still involved and the calves are not identical to either parent.
Cloning
Advantages
Disadvantages
If a clone is susceptible to
disease or changes in
environment, then all the clones
will be susceptible.
It will lead to less variation, and
less opportunity to create new
varieties in the future.
Stem cells
During the development of an embryo most of the cells become specialised. They cannot later
change to become a different type of cell.
But embryos contain a special type of cell called stem cells. These can grow into any type of cell
found in the body. They are not specialised.
Stem cells are extracted from a 5-7 day old blastocyst.
Stem cells can divide in culture to form more of the same kind this is called a stem cell line.
Therapeutic cloning
If you were to receive medical treatment with cells grown from stem cells, your body's immune
system would recognise the cells as foreign, and they would be rejected and die.
But this would not happen if you received cells with the same genes as you.
This could be done by cloning one of your cells to produce an embryo, then taking stem cells from
this.
Against
Ribonucleic acid (RNA) is a chemical like DNA. However, RNA are single stranded and has U base
instead of T
There are two stages: transcription (which occurs in the nucleus) and translation (which occurs in the
cytoplasm).
Transcription
1) The strands of DNA separate
2) Strands of mRNA form as the bases of RNA nucleotides combine with their complementary bases
of the single stranded DNA.
3) The strands of mRNA separate from their respective strands of complementary strands of DNA.
They pass from the nucleus through gaps
Translation
4) Each strand of mRNA binds to a ribosome creating an mRNA-ribosome complex.
5) Each type of tRNA molecule binds to its particular type of amino acid dissolved in the cytoplasm,
depending on the codon it carries.
6) tRNA/amino acid combinations pass to the mRNA-ribosome complex. The exposed bases of tRNA
bind to the complementary bases of mRNA. Chemical bonds form between the amino acids next to
each other.
7) Once the bonds form, each tRNA separates from its amino acid and the mRNA strand.
8) The linked amino acids form a polypeptide.
1.7 - Enzymes
Enzymes are soluble protein molecules that can speed up chemical reactions in cells.
These reactions include respiration, photosynthesis and making new proteins. For this reason
enzymes are sometimes called biological catalysts.
Enzymes speed up (catalyse) chemical reactions occurring inside and outside of living cells. This includes:
DNA replication (DNA polymerase breaks down the double helix before DNA replication, also
involved in checking the copying of the DNA strand.)
Protein synthesis (Speeds up the rate of the joining together of individual amino acids)
Digestion (Different enzymes break down large food molecules in the mouth, stomach and small
intestine to smaller ones so they can be absorbed into the cells).
Each enzyme will only speed up one reaction as the shape of the enzyme molecule needs to match
the shape of the molecule it reacts with (the substrate molecule).
The part of the enzyme molecule that matches the substrate is called the active site.
Enzymes and pH
Most enzymes work fastest in neutral conditions. Making the solution more acidic or alkaline will
slow the reaction down. At extremes of pH the reaction will stop altogether.
Some enzymes, such as those used in digestion, are adapted to work faster in unusual pH
conditions and may have an optimum pH of 2 (very acidic) if they act in the stomach.
Enzymes will work best if there is plenty of substrate available. As the concentration of the substrate
increases, so does the enzyme activity.
However, the enzyme activity does not increase without end. This is because the enzyme can't work
any faster even though there is plenty of substrate available.
Enzymes work best at their optimum temperature. This is why homeostasis is important - to keep
our body temperature at a constant 37C.
As the temperature increases, so does the rate of chemical reaction. This is because heat energy
causes more collisions, with more energy, between the enzyme molecules and other molecules.
However, if the temperature gets too high, the enzyme is denatured and stops working.
Enzymes are specific. Only molecules with the correct shape can fit into the enzyme. Just like only
one key can open a lock, only one type of enzyme can speed up a specific reaction. This is called
the lock and key model.
The important part of an enzyme is called the active site. This is where specific molecules bind to
the enzyme and the reaction occurs.
Anything that changes the shape of the active site stops the enzyme from working.
The shape of the active site is affected by pH. This is why enzymes will only work at a specific pH,
as well as a specific temperature. Change the pH and the enzyme stops working.
Increasing the temperature to 60C will cause a permanent change to the shape of the active site.
This is why enzymes stop working when they are heated. We say they have become denatured.
Respiration is not the same thing as breathing. That is more properly called ventilation.
In aerobic respiration, oxygen is used to release energy from molecules such as glucose.
Aerobic respiration needs oxygen to work. Most of the chemical reactions involved in the process
happen in tiny objects inside the cell cytoplasm, called mitochondria.
The energy released by respiration is used to make large molecules from smaller ones. (In plants,
for example, sugars, nitrates and other nutrients are converted into amino acids. Amino acids can
then join together to make proteins.)
Blood carries oxygen and nutrients to the body's cells, and waste products away from them.
The diagram outlines the circulatory system. Oxygenated blood is shown in red, and deoxygenated blood in
blue.
Anaerobic respiration
When exercising very hard, the heart cannot get enough oxygen to the muscles. Anaerobic
respiration does not need oxygen. It releases energy from glucose but the amount is much lower.
It happens when there is not enough oxygen for aerobic respiration.
Much less energy is released by anaerobic respiration than by aerobic respiration. The lactic acid
that forms causes muscle fatigue and pain.
During exercise, the muscle cells respire more than they do at rest. This means:
This is achieved by increasing the breathing rate and heart rate. The increase in heart rate can be detected
by measuring the pulse rate.
The stroke volume also increases this is the volume of blood pumped each beat
During hard exercise, the oxygen supply may not be enough for the needs of the muscle cells.
When this happens, anaerobic respiration takes place, as well as aerobic respiration.
Fit people are able to carry out physical activities more effectively than unfit people. Their pulse rate
is likely to return to normal more quickly after exercise.
During hard exercise when anaerobic respiration occurs with aerobic respiration, an oxygen debt
builds up. This is now known as Excess Post-exercise Oxygen Debt or EPOC.
This is because glucose is not broken down completely to form carbon dioxide and water. Some of
it is broken down to form lactic acid.
Panting after exercise provides oxygen to break down lactic acid.
The increased heart rate also allows lactic acid to be carried away by the blood to the liver, where it
is broken down.
2.2 Photosynthesis
A process in which plants absorb sunlight, carbon dioxide and water to produce glucose and oxygen.
Structure of a leaf
The equation for photosynthesis is:
Carbon dioxide and water glucose and oxygen
Adaption
Large surface area
Thin
Purpose
To absorb more light
Short distance for carbon dioxide to diffuse into leaf
cells
Chlorophyll
Network of veins
Inside of a leaf
Adaption
Epidermis is thin and transparent
Thin cuticle made of wax
Palisade cell layer at top of leaf
Spongy layer
Purpose
To allow more light to reach the palisade cells
To protect the leaf without blocking out light
To absorb more light
Air spaces allow carbon dioxide to diffuse through
the leaf, and increase the surface area
Without enough light, a plant cannot photosynthesise very quickly, even if there is plenty of water
and carbon dioxide. Increasing the light intensity will boost the speed of photosynthesis.
Sometimes photosynthesis is limited by the concentration of carbon dioxide in the air. Even if there
is plenty of light, a plant cannot photosynthesise if there is insufficient carbon dioxide.
If it gets too cold, the rate of photosynthesis will decrease. Plants cannot photosynthesise if it gets
too hot.
Farmers can use their knowledge of these limiting factors to increase crop growth in greenhouses.
They may use artificial light so that photosynthesis can continue beyond daylight hours, or in a
higher-than-normal light intensity.
The use of paraffin lamps inside a greenhouse increases the rate of photosynthesis because the
burning paraffin produces carbon dioxide, and heat too.
2.3 Transpiration
Transpiration explains how water moves up the plant against gravity in tubes made of dead xylem
cells without the use of a pump.
Transpiration the movement of water and mineral salts from roots to leaves in plants.
Water on the surface of spongy and palisade cells (inside the leaf) evaporates and then diffuses out
of the leaf.
More water is drawn out of the xylem cells inside the leaf to replace what's lost.
As the xylem cells make a continuous tube from the leaf, down the stem to the roots, this acts like a
drinking straw, producing a flow of water and dissolved minerals from roots to leaves.
Factors that speed up transpiration will also increase the rate of water uptake from the soil. When
water is scarce, or the roots are damaged, it increases a plant's chance of survival if the
transpiration rate can be slowed down.
Plants can do this themselves by wilting, or it can be done artificially, like removing some of the
leaves from cuttings before they have chance to grow new roots.
Description
In bright light transpiration
increases
Temperature
Wind
Humidity
Explanation
The stomata (openings in the leaf)
open wider to allow more carbon
dioxide into the leaf for
photosynthesis
Evaporation and diffusion are
faster at higher temperatures
Water vapour is removed quickly
by air movement, speeding up
diffusion of more water vapour out
of the leaf
Diffusion of water vapour out of
the leaf slows down if the leaf is
already surrounded by moist air
Xylem moves water and solutes from the roots to the leaves
Phloem moves food substances from leaves to the rest of the plant.
Both of these systems are rows of cells that make continuous tubes running the full length of the plant.
Xylem
Xylem cells have extra reinforcement in their cell walls, and this helps to support the weight of the
plant.
For this reason, the transport systems are arranged differently in root and stem:
In the root it has to resist forces that could pull the plant out of the ground (resist stretching forces)
In the stem it has to resist compression and bending forces caused by the weight of the plant and
the wind.
Process
Transpiration
Phloem
Translocation
What is moved
Moves water and
minerals from roots to
leaves
Moves food substances
from leaves to rest of
plant
Structure
Columns of hollow,
dead reinforced cells
Columns of living cells
Plants absorb water from the soil by osmosis. Root hair cells are adapted for this by having a large
surface area to speed up osmosis.
The absorbed water is transported through the roots to the rest of the plant where it is used for different
purposes:
Leaves
Leaves are adapted for photosynthesis by having a large surface area, and contain openings, called
stomata to allow carbon dioxide into the leaf.
Although these design features are good for photosynthesis, they can result in the leaf losing a lot of
water.
The cells inside the leaf have water on their surface. Some of this water evaporates, and the water
vapour can then escape from inside the leaf by diffusion
To reduce loss the leaf is coated in a wax cuticle to stop the water vapour escaping through the
epidermis.
Leaves usually have fewer stomata on their top surface to reduce this water loss.
Plants growing in drier conditions tend to have small numbers of tiny stomata and only on their
lower leaf surface, to save water loss.
Most plants regulate the size of stomata with guard cells.
In low light the guard cells lose water and become flaccid, causing the stomata to close. They would
normally only close in the dark when no carbon dioxide is needed for photosynthesis.
Turgidity
Most plant cells are turgid at all times. This supports the weight of the plant, which is especially
important where there is no woody tissue, such as leaves, shoot and root tip.
If the plant loses water faster than it can be absorbed the cells lose turgor pressure and begin to
wilt.
Osmosis
Osmosis is the movement of water molecules from an area of high concentration of water to an
area of lower concentration of water through a partially permeable membrane.
An example is the flooding of plants by sea water. Sea water contains many chemicals in solution,
such as salt. Osmosis will move water across the plant cell membrane, from the weaker to the
stronger solution.
Whenever a scientist studies an area it is usually not possible to look at the entire environment in
detail. Therefore, the scientist samples a section or small portion.
Sampling several small sections is representative of the whole area. The sampling technique used
depends on the habitat and type of organisms present.
Pooters
Sweep nets
Sweep nets are used in areas of long grass to catch organisms. They can also be used in ponds.
Pitfall traps
Quadrats
They are used to sample all the plant species in a particular area.
Environmental factors
Device
Description
Light intensity can be measured using a light
intensity meter.
Fossils the preserved remains of organisms that lived a long time ago
Fossils of the simplest organisms are found in the oldest rocks, and fossils of more complex
organisms in the newest rocks. This supports the theory of evolution, which states that simple life
forms gradually evolved into more complex ones.
Certain environmental conditions drastically slow down the decaying process, helping to preserve the
tissues. Examples of this are:
If these conditions are not present, the remains will not be fossilised.
This makes tracing the story of evolution of any one species challenging.
In most cases there are big gaps in fossil records. Problems also arise as soft tissues decay
resulting in scientists having to estimate what the organism was like. Finally, there are also lots of
fossils that we haven't yet found.
Many vertebrates have a very similar bone structure despite their limbs looking very different on the
outside. This structure is known as the pentadactyl limb five fingered.
This suggests that many vertebrates descended from the same common ancestor.
Modern horse
Time period
Height
1.6 metres
Time period
Height
1.0 metres
1.0 metres
0.6 metres
0.4 metres
Pliohippus
Merychippus
Mesohippus
Eohippus
3.2 Growth
Humans are made of millions of cells. This has a number of benefits:
Cell specialisation
Plant
Mainly at shoot and root tips and in
special growth zones like buds
Size increase often caused by
increasing the size (elongation) of
cells by absorbing water into the
vacuole
Most plant cells can differentiate
into different cell types
Animal
New cells can be made by most
tissues
Size increase is brought about by
increasing the number of cells
3.3 Blood
Blood is a liquid tissue consisting of:
Plasma
Red blood cells
White blood cells
Platelets
Typically a biconcave disc shape provides a large surface area to volume ratio for oxygen to
diffuse in and out of the cell
Without a nucleus makes room for as much haemoglobin as possible
Contain the pigment haemoglobin, which imparts the red colour to blood
Haemoglobin can reversibly combine with oxygen to produce oxyhaemoglobin, which releases
oxygen to tissues around the body
Have a nucleus
Lymphocytes make antibodies bind to microorganisms that cause disease and destroy them
Phagocytes surround and destroys foreign cells that enter the body
Contain a cytoplasm allows them to access tissues so they can protect the body by attacking and
destroying bacteria and viruses.
Plasma
Straw-coloured liquid
Transports dissolved substances around the body, such as hormones, nutrients and waste
substances.
Platelets
Heart
A living tissue is made from a group of cells with a similar structure and function, which all work
together to do a particular job.
An organ is made from a group of different tissues, which all work together to do a particular job.
An organ system is made from a group of different organs, which all work together to do a
particular job.
1. A vena cava brings deoxygenated blood from the body into the right atrium.
2. When the atrium is full, muscles in the wall contract and force blood through the values into the
right ventricle. The values have tissue to prevent backflow.
3. When the ventricle is full, the ventricle wall contracts forcing blood through the pulmonary artery
where it picks up oxygen from the lungs.
4. The oxygenated blood returns enter the left atrium through the pulmonary vein.
5. When the atrium is full, the muscle wall contracts and forces blood through the left ventricle.
6. When ventricle wall contracts, this forces the blood out of the aorta to respiring cells in the body.
The left ventricle exerts more pressure than the right ventricle, and so it has a thicker more
muscular wall.
The atria (plural of atrium) exert less pressure than the ventricles so they have a thinner muscular
wall.
Blood vessels that tube shaped organs that carry blood. There are three types: arteries, veins
and capillaries.
Arteries
Carry blood away from the heart.
The blood in arteries has to be under pressure so that it can reach all parts of the body. Therefore,
arteries have strong, thick walls.
Capillaries
Allow substances to diffuse into and out of the blood, into the cells in tissues.
To help this process, they have very think walls
Veins
Have wide passages inside them to carry blood to the heart.
They have to be wide because the blood flows relatively slowly under low pressure.
3.6 The digestive system
The digestive system is made out of the alimentary canal a muscular tube running through the
body from the mouth to the mouth of the anus and several other organs that make chemicals for
digestion (including enzymes)
Process
1) Mouth
Food is broken into smaller pieces during chewing. This increases the surface area for digestive
enzymes to work on.
The bolus (formed by the tongue) is lubricated with saliva in order to make it easier to swallow.
Salivary amylase breaks down the starch in the food
2) Oesophagus
3) Stomach
A muscular tube that makes hydrochloric acid and some enzymes (such as protease to digest
proteins)
Churns the food up with these juices by peristalsis to make a thick paste.
4) Small intestine
A long, coiled muscular tube in while large insoluble food molecules are turned to smaller soluble
ones.
Contains digestive enzymes made by the pancreas and makes its own digestive enzymes as well.
Molecules of digestive food are absorbed into blood using villi which contain capillaries. Food is
moved on using peristalsis.
Pancreas this organ makes digestive enzymes and releases them to the first part of the small intestine.
5) Large intestine
6) Anus
Liver
Digestive food is absorbed by the small intestine and dissolves in the blood plasma. Once in the
blood, it is taken to the live to be processed. Some of the molecules are broken down even more.
Some are built into large molecules again.
The liver makes bile which helps in digestion of fats.
Gall bladder
A small organ that stores bile made by the liver and releases it to the small intestine when needed.
3.8 Villi
The inside wall of the small intestine is thin, with a large surface area. This allows absorption to
happen quickly and efficiently.
To get a big surface area, the inside wall of the small intestine is lined with tiny villi. These stick out
and give a big surface area.
They also contain blood capillaries to carry away the absorbed food molecules.
The villi have a rich blood supply. The blood supply has a lower concentration of food molecules
and this steep concentration gradient between the small intestine and the blood means diffusion
occurs quickly.
Thin wall one cell thick.
Probiotics
Contain live, beneficial bacteria which are usually Lactobacillus and Bifidobacteria that produce
lactic acid in the gut.
Manufacturers of probiotic foods (such as yogurt) claim that these make you healthier by improving
your digestive system helping your body protect itself against diseases and reducing allergies.
However, in 2010, scientists at the European Food Safety Agency looked at the evidence for 180
health claims for probiotics. 10 were rejected completely whilst there was not enough evidence to
support the other 170 claims.
Prebiotics
Substances that the body cannot digest. They act as food for the beneficial bacteria in the gut and
encourage their growth.
Found in tomatoes, bananas, onions which all contain oligosaccharides, a common form of
prebiotic. Can be also found in dairy products or sold in capsules.