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High-Dimensional Statistical Analysis of Neural Signals

Jie Fu National University of Singapore https://sites.google.com/site/bigaidream/ The progress in neuroscience can no longer be made by considering problems whose descriptions require only a small number of variables, and the ability to measure and understand the relationships between high-dimensional spaces of stimuli and neuronal activity patterns is crucial for understanding how networks of neurons store and process information [1]. Though improving upon physical devices is of course indispensability and still an active scientific topic, developing appropriate methods to record, analyze and understand the resulting observations is also needed [2]. However, due to the curse of dimensionality, it is difficult to measure and find statistical relationships between patterns as their dimensionality increases [1]. Many natural signals are sparse or compressible in the sense that they have concise representations when expressed in the proper basis [3]. Neural signal acquisition, spike sorting, neural decoding and control signal generation form the four major components of prosthetic system [3]. My research would focus on the development of new neurostatistical methodologies and algorithms that aim at uncovering meaningful spatiotemporal patterns of high-dimensional neural activity, especially their relationship to intended action and behavioral states, which can potentially improve the performance of neural decoding component. They could provide a critical link between experimental data and theoretical models. For example, a Multi-Electrode Array (MEA) records action potential from a population of neurons providing dynamic perspectives into brain functions [4]. The general techniques for dataset with temporal dependencies analysis can be broadly classified into two approaches: pattern discovery and learning generative statistical models [5]. I am more interested in developing statistical models which provide a principled framework to describe the statistics that govern data generation, and applying them to real neural data.
1. Ganguli, S. and H. Sompolinsky, Compressed sensing, sparsity, and dimensionality in neuronal information processing and data analysis. Annual Review of Neuroscience, 2012. 35: p. 485-508. 2. 3. 4. Mairal, J., Sparse coding for machine learning, image processing and computer vision, 2010, cole normale suprieure de Cachan-ENS Cachan. Cands, E.J. and M.B. Wakin, An introduction to compressive sampling. IEEE Signal Processing Magazine, 2008. 25(2): p. 21-30. Patnaik, D., S. Laxman, and N. Ramakrishnan. Discovering excitatory networks from discrete event streams with applications to neuronal spike train analysis. Ninth IEEE International Conference on in Data Mining. 2009. 5. Laxman, S., P. Sastry, and K. Unnikrishnan, Discovering frequent episodes and learning hidden markov models: A formal connection. IEEE Transactions on Knowledge and Data Engineering, 2005. 17(11): p. 1505-1517.

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